An asymmetric trimer of a glutamate transporter homologue (GLTPH)
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00375
PDB ID: 3V8G
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.2 Å
Number of TM segments = 25
Sequence positions:
A: 49-67|89-104|131-161|193-210|231-250|309-322|386-401
C: 16-31|42-64|86-107|130-161|200-218|229-246|304-321|389-404
B: 13-29|42-67|87-104|134-164|200-217|227-250|309-322|339-353|355-369|382-401
Tilt angles:
A - Segment: 49-67 - Tilt: 48.7°
A - Segment: 89-104 - Tilt: 17.4°
A - Segment: 131-161 - Tilt: 32.5°
A - Segment: 193-210 - Tilt: 41.2°
A - Segment: 231-250 - Tilt: 37.2°
A - Segment: 309-322 - Tilt: 4.9°
A - Segment: 386-401 - Tilt: 25.1°
C - Segment: 16-31 - Tilt: 26.3°
C - Segment: 42-64 - Tilt: 57.1°
C - Segment: 86-107 - Tilt: 53.9°
C - Segment: 130-161 - Tilt: 40.5°
C - Segment: 200-218 - Tilt: 44.0°
C - Segment: 229-246 - Tilt: 40.3°
C - Segment: 304-321 - Tilt: 36.2°
C - Segment: 389-404 - Tilt: 34.3°
B - Segment: 13-29 - Tilt: 35.7°
B - Segment: 42-67 - Tilt: 66.2°
B - Segment: 87-104 - Tilt: 44.5°
B - Segment: 134-164 - Tilt: 16.8°
B - Segment: 200-217 - Tilt: 38.0°
B - Segment: 227-250 - Tilt: 51.6°
B - Segment: 309-322 - Tilt: 23.3°
B - Segment: 339-353 - Tilt: 36.2°
B - Segment: 355-369 - Tilt: 30.9°
B - Segment: 382-401 - Tilt: 33.9°
Structural assessment:
MAIDEN score = -111.8930
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]