Transferrin binding protein A (TBPA) from Neisserial meningitidis serogroup B in complex with full length human transferrin
Organism: Neisseria meningitidis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00593
PDB ID: 3V8X
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 24
Sequence positions:
A: 68-89|104-113|115-121|139-146|223-230|306-311|332-339|401-407|432-438|472-479|502-510|576-585|600-612|618-631|639-653|672-684|690-699|734-742|756-763|790-796|806-812|846-852|863-870|904-910
Tilt angles:
A - Segment: 68-89 - Tilt: 25.4°
A - Segment: 104-113 - Tilt: 32.5°
A - Segment: 115-121 - Tilt: 15.5°
A - Segment: 139-146 - Tilt: 27.5°
A - Segment: 223-230 - Tilt: 27.9°
A - Segment: 306-311 - Tilt: 27.4°
A - Segment: 332-339 - Tilt: 27.6°
A - Segment: 401-407 - Tilt: 28.3°
A - Segment: 432-438 - Tilt: 33.1°
A - Segment: 472-479 - Tilt: 37.5°
A - Segment: 502-510 - Tilt: 40.1°
A - Segment: 576-585 - Tilt: 51.9°
A - Segment: 600-612 - Tilt: 60.6°
A - Segment: 618-631 - Tilt: 61.0°
A - Segment: 639-653 - Tilt: 63.1°
A - Segment: 672-684 - Tilt: 63.2°
A - Segment: 690-699 - Tilt: 48.5°
A - Segment: 734-742 - Tilt: 46.6°
A - Segment: 756-763 - Tilt: 37.6°
A - Segment: 790-796 - Tilt: 36.1°
A - Segment: 806-812 - Tilt: 29.4°
A - Segment: 846-852 - Tilt: 25.6°
A - Segment: 863-870 - Tilt: 27.9°
A - Segment: 904-910 - Tilt: 19.0°
Structural assessment:
MAIDEN score = 48.7191
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]