Transferrin binding protein A (TBPA) from Neisserial meningitidis serogroup B in complex with full length human transferrin
Organism: Neisseria meningitidis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00593
PDB ID: 3V8X
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 19
Sequence positions:
A: 4-12|81-104|112-135|259-267|274-281|349-358|377-386|417-424|452-460|505-521|676-687|697-707|715-728|755-766|768-775
B: 1236-1261|1433-1439|1447-1465|1485-1525
Tilt angles:
A - Segment: 4-12 - Tilt: 35.8°
A - Segment: 81-104 - Tilt: 56.7°
A - Segment: 112-135 - Tilt: 65.2°
A - Segment: 259-267 - Tilt: 49.0°
A - Segment: 274-281 - Tilt: 49.4°
A - Segment: 349-358 - Tilt: 50.1°
A - Segment: 377-386 - Tilt: 50.1°
A - Segment: 417-424 - Tilt: 48.5°
A - Segment: 452-460 - Tilt: 45.6°
A - Segment: 505-521 - Tilt: 42.5°
A - Segment: 676-687 - Tilt: 60.2°
A - Segment: 697-707 - Tilt: 58.7°
A - Segment: 715-728 - Tilt: 61.0°
A - Segment: 755-766 - Tilt: 51.1°
A - Segment: 768-775 - Tilt: 43.3°
B - Segment: 1236-1261 - Tilt: 40.0°
B - Segment: 1433-1439 - Tilt: 20.3°
B - Segment: 1447-1465 - Tilt: 43.3°
B - Segment: 1485-1525 - Tilt: 60.1°
Structural assessment:
MAIDEN score = 401.7158
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]