Full-Length Transglycosylase PBP1b from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00912
PDB ID: 3VMA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 197-231|285-299|302-316|409-423|434-450|473-479|482-489|499-520|529-550|557-587|669-684|746-757
Tilt angles:
A - Segment: 197-231 - Tilt: 64.3°
A - Segment: 285-299 - Tilt: 40.3°
A - Segment: 302-316 - Tilt: 37.8°
A - Segment: 409-423 - Tilt: 30.9°
A - Segment: 434-450 - Tilt: 58.4°
A - Segment: 473-479 - Tilt: 30.4°
A - Segment: 482-489 - Tilt: 22.3°
A - Segment: 499-520 - Tilt: 60.1°
A - Segment: 529-550 - Tilt: 48.2°
A - Segment: 557-587 - Tilt: 44.3°
A - Segment: 669-684 - Tilt: 14.9°
A - Segment: 746-757 - Tilt: 36.1°
Structural assessment:
MAIDEN score = -7.3852
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]