Full-Length Transglycosylase PBP1b from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00912
PDB ID: 3VMA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
A: 171-190|192-206|217-228|231-247|304-362|530-554|557-606
Tilt angles:
A - Segment: 171-190 - Tilt: 26.8°
A - Segment: 192-206 - Tilt: 34.0°
A - Segment: 217-228 - Tilt: 34.3°
A - Segment: 231-247 - Tilt: 20.3°
A - Segment: 304-362 - Tilt: 60.5°
A - Segment: 530-554 - Tilt: 63.7°
A - Segment: 557-606 - Tilt: 66.7°
Structural assessment:
MAIDEN score = 54.0926
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]