MATE in the bent conformation
Organism: Pyrococcus furiosus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01554
PDB ID: 3VVO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 22-34|60-72|97-110|140-154|166-179|198-211|240-256|280-292|324-338|357-371|383-401|418-431
Tilt angles:
A - Segment: 22-34 - Tilt: 27.4°
A - Segment: 60-72 - Tilt: 12.4°
A - Segment: 97-110 - Tilt: 17.0°
A - Segment: 140-154 - Tilt: 18.6°
A - Segment: 166-179 - Tilt: 33.0°
A - Segment: 198-211 - Tilt: 18.7°
A - Segment: 240-256 - Tilt: 39.5°
A - Segment: 280-292 - Tilt: 23.6°
A - Segment: 324-338 - Tilt: 34.4°
A - Segment: 357-371 - Tilt: 39.8°
A - Segment: 383-401 - Tilt: 43.4°
A - Segment: 418-431 - Tilt: 26.0°
Structural assessment:
MAIDEN score = -78.9156
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]