Calcium pump and sarcolipin from rabbit fast twitch skeletal muscle in the E1.Mg²⁺ state
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3W5A
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.7 Å
Number of TM segments = 21
Sequence positions:
A: 60-78|85-100|263-276|288-307|766-783|785-799|835-852|896-914|936-962|966-984
C: 8-28
B: 60-75|87-103|263-279|288-307|766-783|785-804|837-852|897-914|931-948|967-984
Tilt angles:
A - Segment: 60-78 - Tilt: 30.1°
A - Segment: 85-100 - Tilt: 18.7°
A - Segment: 263-276 - Tilt: 27.7°
A - Segment: 288-307 - Tilt: 35.9°
A - Segment: 766-783 - Tilt: 19.3°
A - Segment: 785-799 - Tilt: 32.4°
A - Segment: 835-852 - Tilt: 34.5°
A - Segment: 896-914 - Tilt: 29.5°
A - Segment: 936-962 - Tilt: 5.0°
A - Segment: 966-984 - Tilt: 40.1°
C - Segment: 8-28 - Tilt: 46.0°
B - Segment: 60-75 - Tilt: 16.8°
B - Segment: 87-103 - Tilt: 27.2°
B - Segment: 263-279 - Tilt: 30.2°
B - Segment: 288-307 - Tilt: 42.7°
B - Segment: 766-783 - Tilt: 26.6°
B - Segment: 785-804 - Tilt: 38.4°
B - Segment: 837-852 - Tilt: 14.4°
B - Segment: 897-914 - Tilt: 37.4°
B - Segment: 931-948 - Tilt: 35.0°
B - Segment: 967-984 - Tilt: 35.7°
Structural assessment:
MAIDEN score = -212.3381
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]