Na⁺-bound Na⁺,K⁺-ATPase preceding the E1P state without oligomycin
Organism: Sus scrofa
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3WGU
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 12
Sequence positions:
A: 60-84|100-119|260-279|291-310|744-762|773-793|816-839|890-910|922-941|958-977
B: 1017-1047
G: 1312-1330
Tilt angles:
A - Segment: 60-84 - Tilt: 22.6°
A - Segment: 100-119 - Tilt: 10.7°
A - Segment: 260-279 - Tilt: 11.5°
A - Segment: 291-310 - Tilt: 26.6°
A - Segment: 744-762 - Tilt: 19.8°
A - Segment: 773-793 - Tilt: 18.2°
A - Segment: 816-839 - Tilt: 29.1°
A - Segment: 890-910 - Tilt: 17.6°
A - Segment: 922-941 - Tilt: 13.2°
A - Segment: 958-977 - Tilt: 25.7°
B - Segment: 1017-1047 - Tilt: 50.3°
G - Segment: 1312-1330 - Tilt: 11.4°
Structural assessment:
MAIDEN score = -82.4490
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]