Wild-type PorB from Neisseria meningitidis serogroup B
Organism: Neisseria meningitidis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00267
PDB ID: 3WI4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 2-18|29-47|139-144|158-163|171-176|191-196|207-212|226-232|245-251|262-268|282-290|296-305
Tilt angles:
A - Segment: 2-18 - Tilt: 67.6°
A - Segment: 29-47 - Tilt: 69.1°
A - Segment: 139-144 - Tilt: 20.3°
A - Segment: 158-163 - Tilt: 8.4°
A - Segment: 171-176 - Tilt: 8.6°
A - Segment: 191-196 - Tilt: 16.5°
A - Segment: 207-212 - Tilt: 12.8°
A - Segment: 226-232 - Tilt: 22.6°
A - Segment: 245-251 - Tilt: 34.5°
A - Segment: 262-268 - Tilt: 36.5°
A - Segment: 282-290 - Tilt: 42.2°
A - Segment: 296-305 - Tilt: 52.3°
Structural assessment:
MAIDEN score = 256.7638
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]