Light-driven sodium pump KR2 in acidic state
Organism: Dokdonia eikasta
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3X3B
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 7
Sequence positions:
A: 30-48|62-80|106-122|141-158|165-183|207-224|241-260
Tilt angles:
A - Segment: 30-48 - Tilt: 24.1°
A - Segment: 62-80 - Tilt: 6.0°
A - Segment: 106-122 - Tilt: 1.1°
A - Segment: 141-158 - Tilt: 3.1°
A - Segment: 165-183 - Tilt: 14.8°
A - Segment: 207-224 - Tilt: 17.1°
A - Segment: 241-260 - Tilt: 18.0°
Structural assessment:
MAIDEN score = -58.5508
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]