Light-driven sodium pump KR2 in acidic state
Organism: Dokdonia eikasta
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3X3B
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.1 Å
Number of TM segments = 7
Sequence positions:
A: 30-46|56-71|102-117|138-155|160-175|205-220|238-257
Tilt angles:
A - Segment: 30-46 - Tilt: 33.2°
A - Segment: 56-71 - Tilt: 16.4°
A - Segment: 102-117 - Tilt: 17.1°
A - Segment: 138-155 - Tilt: 30.0°
A - Segment: 160-175 - Tilt: 26.5°
A - Segment: 205-220 - Tilt: 32.2°
A - Segment: 238-257 - Tilt: 36.2°
Structural assessment:
MAIDEN score = -29.7593
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]