H-Translocating Pyrophosphatase
Organism: Vigna radiata (Mung bean)
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03030
PDB ID: 4A01
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 28
Sequence positions:
A: 10-25|96-111|139-156|194-212|226-240|293-308|325-341|365-381|404-419|459-474|479-496|542-559|573-589|736-752
B: 10-25|96-112|139-156|195-212|224-239|293-308|325-341|365-383|404-419|459-474|479-496|542-559|573-589|737-752
Tilt angles:
A - Segment: 10-25 - Tilt: 3.6°
A - Segment: 96-111 - Tilt: 10.1°
A - Segment: 139-156 - Tilt: 32.0°
A - Segment: 194-212 - Tilt: 32.1°
A - Segment: 226-240 - Tilt: 18.9°
A - Segment: 293-308 - Tilt: 9.8°
A - Segment: 325-341 - Tilt: 31.3°
A - Segment: 365-381 - Tilt: 17.4°
A - Segment: 404-419 - Tilt: 12.9°
A - Segment: 459-474 - Tilt: 18.5°
A - Segment: 479-496 - Tilt: 26.5°
A - Segment: 542-559 - Tilt: 31.8°
A - Segment: 573-589 - Tilt: 31.1°
A - Segment: 736-752 - Tilt: 17.8°
B - Segment: 10-25 - Tilt: 4.3°
B - Segment: 96-112 - Tilt: 10.9°
B - Segment: 139-156 - Tilt: 32.6°
B - Segment: 195-212 - Tilt: 35.0°
B - Segment: 224-239 - Tilt: 25.9°
B - Segment: 293-308 - Tilt: 8.2°
B - Segment: 325-341 - Tilt: 31.9°
B - Segment: 365-383 - Tilt: 23.6°
B - Segment: 404-419 - Tilt: 14.5°
B - Segment: 459-474 - Tilt: 20.0°
B - Segment: 479-496 - Tilt: 25.7°
B - Segment: 542-559 - Tilt: 32.8°
B - Segment: 573-589 - Tilt: 29.4°
B - Segment: 737-752 - Tilt: 24.4°
Structural assessment:
MAIDEN score = -291.9109
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]