Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00137
PDB ID: 4B2Q
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.6 Å
Number of TM segments = 10
Sequence positions:
Q: 3-27
j: 3-34
s: 7-38|41-72
q: 6-34|43-74
S: 2-27
r: 7-38|40-70
R: 3-30
Tilt angles:
Q - Segment: 3-27 - Tilt: 40.1°
j - Segment: 3-34 - Tilt: 55.0°
s - Segment: 7-38 - Tilt: 54.5°
s - Segment: 41-72 - Tilt: 51.2°
q - Segment: 6-34 - Tilt: 48.9°
q - Segment: 43-74 - Tilt: 48.7°
S - Segment: 2-27 - Tilt: 40.0°
r - Segment: 7-38 - Tilt: 50.1°
r - Segment: 40-70 - Tilt: 40.2°
R - Segment: 3-30 - Tilt: 46.3°
Structural assessment:
MAIDEN score = -81.3507
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]