F-type ATP synthase c-ring from Acetobacterium woodii
Organism: Acetobacterium woodii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00137
PDB ID: 4BEM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.4 Å
Number of TM segments = 10
Sequence positions:
A: 3-22
C: 3-22
B: 3-22
E: 3-22
D: 3-22
G: 3-22
F: 3-22
I: 3-22
H: 3-22
J: 20-39
Tilt angles:
A - Segment: 3-22 - Tilt: 10.4°
C - Segment: 3-22 - Tilt: 8.4°
B - Segment: 3-22 - Tilt: 9.7°
E - Segment: 3-22 - Tilt: 7.6°
D - Segment: 3-22 - Tilt: 6.3°
G - Segment: 3-22 - Tilt: 10.2°
F - Segment: 3-22 - Tilt: 8.9°
I - Segment: 3-22 - Tilt: 11.6°
H - Segment: 3-22 - Tilt: 10.6°
J - Segment: 20-39 - Tilt: 12.3°
Structural assessment:
MAIDEN score = -43.8859
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]