NavCt voltage-gated sodium channel
Organism: Caldalkalibacillus thermarum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00520
PDB ID: 4BGN
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 6
Sequence positions:
A: 29-46|58-75|91-107|114-130|136-165|212-230
Tilt angles:
A - Segment: 29-46 - Tilt: 8.4°
A - Segment: 58-75 - Tilt: 34.4°
A - Segment: 91-107 - Tilt: 26.5°
A - Segment: 114-130 - Tilt: 34.2°
A - Segment: 136-165 - Tilt: 50.4°
A - Segment: 212-230 - Tilt: 36.5°
Structural assessment:
MAIDEN score = -52.4196
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]