NavCt voltage-gated sodium channel
Organism: Caldalkalibacillus thermarum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00520
PDB ID: 4BGN
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 4
Sequence positions:
A: 4-20|29-41|113-133|183-201
Tilt angles:
A - Segment: 4-20 - Tilt: 47.8°
A - Segment: 29-41 - Tilt: 16.1°
A - Segment: 113-133 - Tilt: 53.5°
A - Segment: 183-201 - Tilt: 52.9°
Structural assessment:
MAIDEN score = -21.8854
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]