Structure determination of an integral membrane kinase
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01219
PDB ID: 4BPD
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.8 Å
Number of TM segments = 8
Sequence positions:
A: 21-45|49-71|88-110
C: 243-264|283-303
B: 124-144|148-169|192-213
Tilt angles:
A - Segment: 21-45 - Tilt: 14.4°
A - Segment: 49-71 - Tilt: 23.1°
A - Segment: 88-110 - Tilt: 23.4°
C - Segment: 243-264 - Tilt: 12.6°
C - Segment: 283-303 - Tilt: 13.8°
B - Segment: 124-144 - Tilt: 10.1°
B - Segment: 148-169 - Tilt: 8.0°
B - Segment: 192-213 - Tilt: 31.3°
Structural assessment:
MAIDEN score = -97.9474
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]