Outer membrane protein insertase BamA with one POTRA domain
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF01103
PDB ID: 4C4V
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 15
Sequence positions:
A: 427-434|436-444|457-463|466-473|485-492|509-515|525-532|570-577|592-601|609-617|629-637|712-720|734-742|769-776|780-789
Tilt angles:
A - Segment: 427-434 - Tilt: 45.0°
A - Segment: 436-444 - Tilt: 44.0°
A - Segment: 457-463 - Tilt: 43.5°
A - Segment: 466-473 - Tilt: 41.3°
A - Segment: 485-492 - Tilt: 38.0°
A - Segment: 509-515 - Tilt: 36.0°
A - Segment: 525-532 - Tilt: 36.5°
A - Segment: 570-577 - Tilt: 46.8°
A - Segment: 592-601 - Tilt: 55.3°
A - Segment: 609-617 - Tilt: 50.9°
A - Segment: 629-637 - Tilt: 50.7°
A - Segment: 712-720 - Tilt: 48.5°
A - Segment: 734-742 - Tilt: 38.1°
A - Segment: 769-776 - Tilt: 39.9°
A - Segment: 780-789 - Tilt: 50.7°
Structural assessment:
MAIDEN score = 48.9671
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]