Outer membrane protein insertase BamA with one POTRA domain
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF01103
PDB ID: 4C4V
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 13
Sequence positions:
A: 108-117|120-129|138-145|164-171|178-185|224-231|246-255|263-271|284-292|349-357|373-382|403-413|415-429
Tilt angles:
A - Segment: 108-117 - Tilt: 50.4°
A - Segment: 120-129 - Tilt: 43.9°
A - Segment: 138-145 - Tilt: 34.3°
A - Segment: 164-171 - Tilt: 27.0°
A - Segment: 178-185 - Tilt: 27.9°
A - Segment: 224-231 - Tilt: 31.9°
A - Segment: 246-255 - Tilt: 45.8°
A - Segment: 263-271 - Tilt: 41.2°
A - Segment: 284-292 - Tilt: 42.5°
A - Segment: 349-357 - Tilt: 42.2°
A - Segment: 373-382 - Tilt: 42.3°
A - Segment: 403-413 - Tilt: 52.7°
A - Segment: 415-429 - Tilt: 53.2°
Structural assessment:
MAIDEN score = 444.6244
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]