Mechanism of farnesylated CAAX protein processing by the integral membrane protease Rce1
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02517
PDB ID: 4CAD
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 8
Sequence positions:
C: 436-450|466-479|507-525|540-558|576-590|609-623|637-653|657-670
Tilt angles:
C - Segment: 436-450 - Tilt: 13.9°
C - Segment: 466-479 - Tilt: 21.4°
C - Segment: 507-525 - Tilt: 40.7°
C - Segment: 540-558 - Tilt: 47.5°
C - Segment: 576-590 - Tilt: 24.3°
C - Segment: 609-623 - Tilt: 23.1°
C - Segment: 637-653 - Tilt: 29.5°
C - Segment: 657-670 - Tilt: 19.5°
Structural assessment:
MAIDEN score = -49.5933
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]