Cryo-EM of the Sec61-complex bound to the idle 80S ribosome
Organism: Canis lupus familiaris
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 4CG7
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 36-49|78-99|116-129|153-167|178-193|244-257|288-302|362-376|425-441|445-455
C: 71-83
B: 40-57
Tilt angles:
A - Segment: 36-49 - Tilt: 24.7°
A - Segment: 78-99 - Tilt: 61.9°
A - Segment: 116-129 - Tilt: 33.7°
A - Segment: 153-167 - Tilt: 36.3°
A - Segment: 178-193 - Tilt: 33.5°
A - Segment: 244-257 - Tilt: 24.7°
A - Segment: 288-302 - Tilt: 34.6°
A - Segment: 362-376 - Tilt: 31.6°
A - Segment: 425-441 - Tilt: 37.8°
A - Segment: 445-455 - Tilt: 24.7°
C - Segment: 71-83 - Tilt: 5.5°
B - Segment: 40-57 - Tilt: 56.0°
Structural assessment:
MAIDEN score = -43.5508
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]