Cryo-EM of the Sec61-complex bound to the idle 80S ribosome
Organism: Canis lupus familiaris
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00344
PDB ID: 4CG7
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 12-25|54-73|92-105|129-142|154-168|220-232|264-278|337-351|401-415|420-431
C: 525-536
B: 483-500
Tilt angles:
A - Segment: 12-25 - Tilt: 26.2°
A - Segment: 54-73 - Tilt: 60.2°
A - Segment: 92-105 - Tilt: 27.4°
A - Segment: 129-142 - Tilt: 37.9°
A - Segment: 154-168 - Tilt: 39.0°
A - Segment: 220-232 - Tilt: 15.1°
A - Segment: 264-278 - Tilt: 35.4°
A - Segment: 337-351 - Tilt: 34.9°
A - Segment: 401-415 - Tilt: 34.5°
A - Segment: 420-431 - Tilt: 20.5°
C - Segment: 525-536 - Tilt: 10.3°
B - Segment: 483-500 - Tilt: 57.1°
Structural assessment:
MAIDEN score = -74.9676
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]