An engineered OmpG loop6-deletion
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF09381
PDB ID: 4CTD
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 26
Sequence positions:
A: 8-14|33-39|43-49|70-76|85-91|112-119|127-135|151-159|165-173|192-200|203-211|224-232|235-242|261-267
B: 8-13|33-39|43-49|70-76|85-91|112-120|126-134|153-161|164-172|226-232|235-241|262-267
Tilt angles:
A - Segment: 8-14 - Tilt: 32.7°
A - Segment: 33-39 - Tilt: 27.9°
A - Segment: 43-49 - Tilt: 29.4°
A - Segment: 70-76 - Tilt: 29.0°
A - Segment: 85-91 - Tilt: 37.2°
A - Segment: 112-119 - Tilt: 41.5°
A - Segment: 127-135 - Tilt: 41.9°
A - Segment: 151-159 - Tilt: 45.6°
A - Segment: 165-173 - Tilt: 43.4°
A - Segment: 192-200 - Tilt: 42.2°
A - Segment: 203-211 - Tilt: 45.1°
A - Segment: 224-232 - Tilt: 48.0°
A - Segment: 235-242 - Tilt: 39.8°
A - Segment: 261-267 - Tilt: 31.9°
B - Segment: 8-13 - Tilt: 29.3°
B - Segment: 33-39 - Tilt: 26.9°
B - Segment: 43-49 - Tilt: 31.5°
B - Segment: 70-76 - Tilt: 34.6°
B - Segment: 85-91 - Tilt: 44.0°
B - Segment: 112-120 - Tilt: 48.4°
B - Segment: 126-134 - Tilt: 53.8°
B - Segment: 153-161 - Tilt: 50.2°
B - Segment: 164-172 - Tilt: 41.9°
B - Segment: 226-232 - Tilt: 42.7°
B - Segment: 235-241 - Tilt: 33.1°
B - Segment: 262-267 - Tilt: 27.9°
Structural assessment:
MAIDEN score = -19.2700
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]