An engineered OmpG loop6-deletion
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF09381
PDB ID: 4CTD
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 28
Sequence positions:
A: 5-13|23-30|33-40|55-61|70-76|94-99|110-115|127-133|144-150|161-168|176-185|192-201|207-216|223-231
B: 243-248|255-261|270-276|284-292|301-310|322-335|337-348|359-367|372-379|395-401|407-412|426-432|440-445|454-459
Tilt angles:
A - Segment: 5-13 - Tilt: 46.6°
A - Segment: 23-30 - Tilt: 40.3°
A - Segment: 33-40 - Tilt: 37.4°
A - Segment: 55-61 - Tilt: 31.9°
A - Segment: 70-76 - Tilt: 27.0°
A - Segment: 94-99 - Tilt: 29.1°
A - Segment: 110-115 - Tilt: 31.7°
A - Segment: 127-133 - Tilt: 27.3°
A - Segment: 144-150 - Tilt: 26.3°
A - Segment: 161-168 - Tilt: 34.2°
A - Segment: 176-185 - Tilt: 49.7°
A - Segment: 192-201 - Tilt: 53.0°
A - Segment: 207-216 - Tilt: 52.0°
A - Segment: 223-231 - Tilt: 51.0°
B - Segment: 243-248 - Tilt: 27.4°
B - Segment: 255-261 - Tilt: 32.1°
B - Segment: 270-276 - Tilt: 36.2°
B - Segment: 284-292 - Tilt: 47.3°
B - Segment: 301-310 - Tilt: 55.5°
B - Segment: 322-335 - Tilt: 60.6°
B - Segment: 337-348 - Tilt: 59.2°
B - Segment: 359-367 - Tilt: 51.6°
B - Segment: 372-379 - Tilt: 37.2°
B - Segment: 395-401 - Tilt: 31.5°
B - Segment: 407-412 - Tilt: 29.9°
B - Segment: 426-432 - Tilt: 22.8°
B - Segment: 440-445 - Tilt: 19.0°
B - Segment: 454-459 - Tilt: 26.1°
Structural assessment:
MAIDEN score = 918.2731
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]