Human kappa opioid receptor in complex with JDTic
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00001
PDB ID: 4DJH
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.2 Å
Number of TM segments = 14
Sequence positions:
A: 13-31|38-55|89-104|118-132|183-199|376-390|420-434
B: 457-478|487-502|533-547|566-580|624-639|827-841|865-880
Tilt angles:
A - Segment: 13-31 - Tilt: 43.3°
A - Segment: 38-55 - Tilt: 32.4°
A - Segment: 89-104 - Tilt: 32.3°
A - Segment: 118-132 - Tilt: 6.9°
A - Segment: 183-199 - Tilt: 27.7°
A - Segment: 376-390 - Tilt: 4.6°
A - Segment: 420-434 - Tilt: 11.9°
B - Segment: 457-478 - Tilt: 50.9°
B - Segment: 487-502 - Tilt: 26.4°
B - Segment: 533-547 - Tilt: 26.0°
B - Segment: 566-580 - Tilt: 12.5°
B - Segment: 624-639 - Tilt: 13.1°
B - Segment: 827-841 - Tilt: 19.7°
B - Segment: 865-880 - Tilt: 11.7°
Structural assessment:
MAIDEN score = -92.2658
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]