Glutamate-GABA antiporter GadC
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00324
PDB ID: 4DJI
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.6 Å
Number of TM segments = 12
Sequence positions:
A: 19-36|40-61|83-118|130-149|151-180|204-220|235-257|288-316|337-357|366-391|409-431|448-467
Tilt angles:
A - Segment: 19-36 - Tilt: 5.7°
A - Segment: 40-61 - Tilt: 30.8°
A - Segment: 83-118 - Tilt: 58.8°
A - Segment: 130-149 - Tilt: 5.6°
A - Segment: 151-180 - Tilt: 50.3°
A - Segment: 204-220 - Tilt: 17.2°
A - Segment: 235-257 - Tilt: 26.8°
A - Segment: 288-316 - Tilt: 52.5°
A - Segment: 337-357 - Tilt: 12.6°
A - Segment: 366-391 - Tilt: 42.6°
A - Segment: 409-431 - Tilt: 36.1°
A - Segment: 448-467 - Tilt: 29.4°
Structural assessment:
MAIDEN score = -155.8999
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]