Glutamate-GABA antiporter GadC
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00324
PDB ID: 4DJI
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.3 Å
Number of TM segments = 12
Sequence positions:
A: 13-27|29-50|77-109|121-138|145-171|192-206|226-245|273-301|326-344|354-378|398-419|436-455
Tilt angles:
A - Segment: 13-27 - Tilt: 8.5°
A - Segment: 29-50 - Tilt: 23.5°
A - Segment: 77-109 - Tilt: 60.3°
A - Segment: 121-138 - Tilt: 15.0°
A - Segment: 145-171 - Tilt: 49.3°
A - Segment: 192-206 - Tilt: 14.4°
A - Segment: 226-245 - Tilt: 23.7°
A - Segment: 273-301 - Tilt: 57.3°
A - Segment: 326-344 - Tilt: 16.8°
A - Segment: 354-378 - Tilt: 44.6°
A - Segment: 398-419 - Tilt: 37.9°
A - Segment: 436-455 - Tilt: 32.6°
Structural assessment:
MAIDEN score = -133.9029
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]