BetP in outward-facing conformation
Organism: Corynebacterium glutamicum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02028
PDB ID: 4DOJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.7 Å
Number of TM segments = 34
Sequence positions:
A: 60-82|84-118|139-163|178-201|232-265|267-296|301-354|362-385|398-421|447-480|489-509|514-538
C: 58-79|91-119|139-162|178-204|231-262|363-388|397-419|452-481|487-507|517-540
B: 60-79|88-119|138-162|178-202|233-262|277-297|299-354|362-386|397-419|449-480|489-508|514-538
Tilt angles:
A - Segment: 60-82 - Tilt: 5.7°
A - Segment: 84-118 - Tilt: 47.8°
A - Segment: 139-163 - Tilt: 12.8°
A - Segment: 178-201 - Tilt: 34.1°
A - Segment: 232-265 - Tilt: 53.4°
A - Segment: 267-296 - Tilt: 22.7°
A - Segment: 301-354 - Tilt: 49.0°
A - Segment: 362-385 - Tilt: 20.8°
A - Segment: 398-421 - Tilt: 23.6°
A - Segment: 447-480 - Tilt: 52.8°
A - Segment: 489-509 - Tilt: 12.6°
A - Segment: 514-538 - Tilt: 42.5°
C - Segment: 58-79 - Tilt: 5.7°
C - Segment: 91-119 - Tilt: 43.0°
C - Segment: 139-162 - Tilt: 18.2°
C - Segment: 178-204 - Tilt: 37.6°
C - Segment: 231-262 - Tilt: 42.8°
C - Segment: 363-388 - Tilt: 29.9°
C - Segment: 397-419 - Tilt: 24.8°
C - Segment: 452-481 - Tilt: 51.5°
C - Segment: 487-507 - Tilt: 8.7°
C - Segment: 517-540 - Tilt: 25.2°
B - Segment: 60-79 - Tilt: 8.8°
B - Segment: 88-119 - Tilt: 48.9°
B - Segment: 138-162 - Tilt: 18.9°
B - Segment: 178-202 - Tilt: 28.0°
B - Segment: 233-262 - Tilt: 48.0°
B - Segment: 277-297 - Tilt: 10.5°
B - Segment: 299-354 - Tilt: 58.2°
B - Segment: 362-386 - Tilt: 22.9°
B - Segment: 397-419 - Tilt: 21.1°
B - Segment: 449-480 - Tilt: 51.7°
B - Segment: 489-508 - Tilt: 17.6°
B - Segment: 514-538 - Tilt: 40.4°
Structural assessment:
MAIDEN score = -381.4832
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]