Yeast F1Fo ATPase c10 ring with bound oligomycin
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00137
PDB ID: 4F4S
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
A: 17-38|47-66
C: 157-174
B: 87-104
E: 310-327|340-357
D: 232-249
Tilt angles:
A - Segment: 17-38 - Tilt: 56.3°
A - Segment: 47-66 - Tilt: 53.4°
C - Segment: 157-174 - Tilt: 51.9°
B - Segment: 87-104 - Tilt: 52.2°
E - Segment: 310-327 - Tilt: 46.4°
E - Segment: 340-357 - Tilt: 49.9°
D - Segment: 232-249 - Tilt: 51.2°
Structural assessment:
MAIDEN score = -27.7243
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]