KdgM porin
Organism: Dickeya dadantii
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF06178
PDB ID: 4FQE
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
A: 4-10|12-19|55-67|72-84|87-94|104-110|117-123|133-139|149-154|159-165
Tilt angles:
A - Segment: 4-10 - Tilt: 40.5°
A - Segment: 12-19 - Tilt: 49.7°
A - Segment: 55-67 - Tilt: 65.5°
A - Segment: 72-84 - Tilt: 57.6°
A - Segment: 87-94 - Tilt: 45.7°
A - Segment: 104-110 - Tilt: 32.8°
A - Segment: 117-123 - Tilt: 19.5°
A - Segment: 133-139 - Tilt: 11.2°
A - Segment: 149-154 - Tilt: 13.6°
A - Segment: 159-165 - Tilt: 25.1°
Structural assessment:
MAIDEN score = 283.4654
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]