Clostridium perfringens NetB toxin in the membrane inserted form
Organism: Clostridium perfringens
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF07968
PDB ID: 4H56
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 14
Sequence positions:
A: 126-132|136-143
C: 125-132|136-143
B: 125-132|136-142
E: 125-132|136-143
D: 125-132|136-143
G: 125-132|136-143
F: 125-132|136-143
Tilt angles:
A - Segment: 126-132 - Tilt: 32.5°
A - Segment: 136-143 - Tilt: 40.6°
C - Segment: 125-132 - Tilt: 31.6°
C - Segment: 136-143 - Tilt: 32.7°
B - Segment: 125-132 - Tilt: 30.9°
B - Segment: 136-142 - Tilt: 35.7°
E - Segment: 125-132 - Tilt: 39.7°
E - Segment: 136-143 - Tilt: 38.2°
D - Segment: 125-132 - Tilt: 35.6°
D - Segment: 136-143 - Tilt: 34.3°
G - Segment: 125-132 - Tilt: 39.6°
G - Segment: 136-143 - Tilt: 43.6°
F - Segment: 125-132 - Tilt: 41.4°
F - Segment: 136-143 - Tilt: 42.1°
Structural assessment:
MAIDEN score = -22.3530
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]