Entire respiratory complex I from Thermus thermophilus
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00361
PDB ID: 4HEA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 62
Sequence positions:
A: 10-28|64-79|95-111
H: 14-35|83-102|121-136|158-174|194-215|243-267|276-293|308-326|337-353
K: 6-21|24-40|57-73
J: 7-23|25-41|51-68|88-103|138-154
M: 2-19|24-41|71-87|96-112|117-131|145-161|195-215|226-241|259-276|284-300|310-327|357-381|389-407|431-447
L: 31-48|72-89|105-121|124-140|157-173|206-226|236-254|266-283|296-312|314-331|368-393|398-414|445-462|488-505|586-603
N: 25-42|59-75|85-100|105-121|133-150|177-200|207-223|232-249|257-272|281-297|324-349|359-376|400-416
Tilt angles:
A - Segment: 10-28 - Tilt: 31.0°
A - Segment: 64-79 - Tilt: 10.6°
A - Segment: 95-111 - Tilt: 7.3°
H - Segment: 14-35 - Tilt: 41.4°
H - Segment: 83-102 - Tilt: 46.8°
H - Segment: 121-136 - Tilt: 18.7°
H - Segment: 158-174 - Tilt: 15.8°
H - Segment: 194-215 - Tilt: 28.7°
H - Segment: 243-267 - Tilt: 44.5°
H - Segment: 276-293 - Tilt: 27.5°
H - Segment: 308-326 - Tilt: 20.0°
H - Segment: 337-353 - Tilt: 26.2°
K - Segment: 6-21 - Tilt: 15.5°
K - Segment: 24-40 - Tilt: 16.6°
K - Segment: 57-73 - Tilt: 11.7°
J - Segment: 7-23 - Tilt: 23.7°
J - Segment: 25-41 - Tilt: 22.3°
J - Segment: 51-68 - Tilt: 11.9°
J - Segment: 88-103 - Tilt: 19.3°
J - Segment: 138-154 - Tilt: 6.9°
M - Segment: 2-19 - Tilt: 21.9°
M - Segment: 24-41 - Tilt: 29.9°
M - Segment: 71-87 - Tilt: 21.0°
M - Segment: 96-112 - Tilt: 16.0°
M - Segment: 117-131 - Tilt: 4.8°
M - Segment: 145-161 - Tilt: 18.8°
M - Segment: 195-215 - Tilt: 23.6°
M - Segment: 226-241 - Tilt: 29.6°
M - Segment: 259-276 - Tilt: 29.5°
M - Segment: 284-300 - Tilt: 4.2°
M - Segment: 310-327 - Tilt: 27.1°
M - Segment: 357-381 - Tilt: 40.2°
M - Segment: 389-407 - Tilt: 27.8°
M - Segment: 431-447 - Tilt: 34.5°
L - Segment: 31-48 - Tilt: 20.7°
L - Segment: 72-89 - Tilt: 26.4°
L - Segment: 105-121 - Tilt: 20.7°
L - Segment: 124-140 - Tilt: 11.4°
L - Segment: 157-173 - Tilt: 6.3°
L - Segment: 206-226 - Tilt: 15.6°
L - Segment: 236-254 - Tilt: 21.3°
L - Segment: 266-283 - Tilt: 24.7°
L - Segment: 296-312 - Tilt: 20.3°
L - Segment: 314-331 - Tilt: 29.9°
L - Segment: 368-393 - Tilt: 40.9°
L - Segment: 398-414 - Tilt: 26.7°
L - Segment: 445-462 - Tilt: 45.6°
L - Segment: 488-505 - Tilt: 18.6°
L - Segment: 586-603 - Tilt: 24.8°
N - Segment: 25-42 - Tilt: 27.8°
N - Segment: 59-75 - Tilt: 18.1°
N - Segment: 85-100 - Tilt: 18.0°
N - Segment: 105-121 - Tilt: 21.8°
N - Segment: 133-150 - Tilt: 17.5°
N - Segment: 177-200 - Tilt: 28.5°
N - Segment: 207-223 - Tilt: 21.3°
N - Segment: 232-249 - Tilt: 27.5°
N - Segment: 257-272 - Tilt: 7.3°
N - Segment: 281-297 - Tilt: 17.7°
N - Segment: 324-349 - Tilt: 33.7°
N - Segment: 359-376 - Tilt: 33.9°
N - Segment: 400-416 - Tilt: 28.0°
Structural assessment:
MAIDEN score = -440.2297
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]