Helicobacter pylori MscS (Closed State)
Organism: Helicobacter pylori
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00924
PDB ID: 4HW9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 9
Sequence positions:
A: 79-92
B: 255-269|297-316|321-338
E: 1253-1260
D: 803-853|976-1010
G: 1656-1675
F: 1502-1511
Tilt angles:
A - Segment: 79-92 - Tilt: 21.9°
B - Segment: 255-269 - Tilt: 46.2°
B - Segment: 297-316 - Tilt: 40.9°
B - Segment: 321-338 - Tilt: 54.3°
E - Segment: 1253-1260 - Tilt: 25.5°
D - Segment: 803-853 - Tilt: 46.9°
D - Segment: 976-1010 - Tilt: 72.8°
G - Segment: 1656-1675 - Tilt: 46.9°
F - Segment: 1502-1511 - Tilt: 43.6°
Structural assessment:
MAIDEN score = -14.0643
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]