Exiguobacterium sibiricum rhodopsin
Organism: Exiguobacterium sibiricum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 4HYJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.9 Å
Number of TM segments = 7
Sequence positions:
A: 14-36|41-59|78-96|115-136|138-155|185-205|209-234
Tilt angles:
A - Segment: 14-36 - Tilt: 40.9°
A - Segment: 41-59 - Tilt: 27.6°
A - Segment: 78-96 - Tilt: 24.2°
A - Segment: 115-136 - Tilt: 33.8°
A - Segment: 138-155 - Tilt: 22.6°
A - Segment: 185-205 - Tilt: 34.4°
A - Segment: 209-234 - Tilt: 48.4°
Structural assessment:
MAIDEN score = -81.0077
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]