Exiguobacterium sibiricum rhodopsin
Organism: Exiguobacterium sibiricum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 4HYJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 7
Sequence positions:
A: 13-30|44-59|74-92|113-128|135-154|173-194|211-229
Tilt angles:
A - Segment: 13-30 - Tilt: 35.4°
A - Segment: 44-59 - Tilt: 29.6°
A - Segment: 74-92 - Tilt: 43.8°
A - Segment: 113-128 - Tilt: 29.6°
A - Segment: 135-154 - Tilt: 47.7°
A - Segment: 173-194 - Tilt: 50.3°
A - Segment: 211-229 - Tilt: 39.4°
Structural assessment:
MAIDEN score = -23.3438
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]