Peptide transporter POT
Organism: Geobacillus kaustophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4IKV
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.5 Å
Number of TM segments = 14
Sequence positions:
A: 27-47|67-88|94-113|121-139|162-181|186-206|224-245|259-280|295-320|328-350|370-388|398-417|437-455|464-484
Tilt angles:
A - Segment: 27-47 - Tilt: 32.2°
A - Segment: 67-88 - Tilt: 40.3°
A - Segment: 94-113 - Tilt: 26.5°
A - Segment: 121-139 - Tilt: 4.1°
A - Segment: 162-181 - Tilt: 16.8°
A - Segment: 186-206 - Tilt: 21.0°
A - Segment: 224-245 - Tilt: 26.2°
A - Segment: 259-280 - Tilt: 33.2°
A - Segment: 295-320 - Tilt: 45.7°
A - Segment: 328-350 - Tilt: 26.0°
A - Segment: 370-388 - Tilt: 27.0°
A - Segment: 398-417 - Tilt: 39.6°
A - Segment: 437-455 - Tilt: 19.6°
A - Segment: 464-484 - Tilt: 26.6°
Structural assessment:
MAIDEN score = -167.4126
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]