Peptide transporter POT (E310Q mutant)
Organism: Geobacillus kaustophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4IKX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 14
Sequence positions:
A: 30-47|67-85|97-114|120-137|162-180|185-204|230-247|258-277|293-317|333-350|368-385|399-418|438-454|467-485
Tilt angles:
A - Segment: 30-47 - Tilt: 26.0°
A - Segment: 67-85 - Tilt: 24.6°
A - Segment: 97-114 - Tilt: 25.2°
A - Segment: 120-137 - Tilt: 23.7°
A - Segment: 162-180 - Tilt: 21.6°
A - Segment: 185-204 - Tilt: 21.5°
A - Segment: 230-247 - Tilt: 11.0°
A - Segment: 258-277 - Tilt: 27.4°
A - Segment: 293-317 - Tilt: 51.5°
A - Segment: 333-350 - Tilt: 24.8°
A - Segment: 368-385 - Tilt: 29.3°
A - Segment: 399-418 - Tilt: 28.4°
A - Segment: 438-454 - Tilt: 17.8°
A - Segment: 467-485 - Tilt: 25.8°
Structural assessment:
MAIDEN score = -144.0317
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]