Peptide transporter POT (E310Q mutant)
Organism: Geobacillus kaustophilus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00854
PDB ID: 4IKX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 14
Sequence positions:
A: 29-46|66-83|98-114|118-135|162-179|183-200|230-245|257-276|291-316|331-347|364-381|394-412|433-448|464-480
Tilt angles:
A - Segment: 29-46 - Tilt: 20.1°
A - Segment: 66-83 - Tilt: 26.2°
A - Segment: 98-114 - Tilt: 14.5°
A - Segment: 118-135 - Tilt: 26.0°
A - Segment: 162-179 - Tilt: 24.4°
A - Segment: 183-200 - Tilt: 16.3°
A - Segment: 230-245 - Tilt: 5.9°
A - Segment: 257-276 - Tilt: 32.7°
A - Segment: 291-316 - Tilt: 50.0°
A - Segment: 331-347 - Tilt: 29.6°
A - Segment: 364-381 - Tilt: 26.0°
A - Segment: 394-412 - Tilt: 36.0°
A - Segment: 433-448 - Tilt: 5.9°
A - Segment: 464-480 - Tilt: 20.6°
Structural assessment:
MAIDEN score = -86.7264
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]