Inward open conformation of the xylose transporter XylE from E. coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00083
PDB ID: 4JA4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 10
Sequence positions:
A: 21-35|60-75|90-105|128-144|171-189|197-211|344-362|368-388|407-424|444-463
Tilt angles:
A - Segment: 21-35 - Tilt: 13.6°
A - Segment: 60-75 - Tilt: 25.3°
A - Segment: 90-105 - Tilt: 20.8°
A - Segment: 128-144 - Tilt: 30.0°
A - Segment: 171-189 - Tilt: 48.6°
A - Segment: 197-211 - Tilt: 24.6°
A - Segment: 344-362 - Tilt: 30.7°
A - Segment: 368-388 - Tilt: 45.5°
A - Segment: 407-424 - Tilt: 35.1°
A - Segment: 444-463 - Tilt: 37.1°
Structural assessment:
MAIDEN score = -45.2915
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]