Inward open conformation of the xylose transporter XylE from E. coli
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00083
PDB ID: 4JA4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 11-24|56-70|78-91|125-138|161-177|194-207|255-280|284-297|314-328|338-357|375-391|408-425
Tilt angles:
A - Segment: 11-24 - Tilt: 32.3°
A - Segment: 56-70 - Tilt: 43.4°
A - Segment: 78-91 - Tilt: 34.1°
A - Segment: 125-138 - Tilt: 7.3°
A - Segment: 161-177 - Tilt: 39.2°
A - Segment: 194-207 - Tilt: 37.9°
A - Segment: 255-280 - Tilt: 66.1°
A - Segment: 284-297 - Tilt: 26.4°
A - Segment: 314-328 - Tilt: 33.6°
A - Segment: 338-357 - Tilt: 49.5°
A - Segment: 375-391 - Tilt: 40.6°
A - Segment: 408-425 - Tilt: 43.2°
Structural assessment:
MAIDEN score = -40.4264
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]