Heavy metal efflux pump, crystal form II
Organism: Ralstonia metallidurans
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00873
PDB ID: 4K0E
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.3 Å
Number of TM segments = 34
Sequence positions:
A: 10-28|326-344|346-371|380-394|417-434|444-465|490-508|827-844|849-872|881-898|918-935|947-967
C: 1945-1963|2249-2267|2275-2296|2303-2318|2343-2360|2368-2389|2418-2435|2732-2749|2821-2839|2844-2862
B: 989-1006|1296-1314|1322-1343|1351-1365|1375-1392|1402-1422|1447-1466|1782-1799|1804-1827|1835-1853|1876-1893|1902-1924
Tilt angles:
A - Segment: 10-28 - Tilt: 12.5°
A - Segment: 326-344 - Tilt: 13.5°
A - Segment: 346-371 - Tilt: 48.5°
A - Segment: 380-394 - Tilt: 5.4°
A - Segment: 417-434 - Tilt: 18.9°
A - Segment: 444-465 - Tilt: 29.5°
A - Segment: 490-508 - Tilt: 16.7°
A - Segment: 827-844 - Tilt: 13.0°
A - Segment: 849-872 - Tilt: 46.2°
A - Segment: 881-898 - Tilt: 8.5°
A - Segment: 918-935 - Tilt: 7.9°
A - Segment: 947-967 - Tilt: 24.0°
C - Segment: 1945-1963 - Tilt: 15.4°
C - Segment: 2249-2267 - Tilt: 7.6°
C - Segment: 2275-2296 - Tilt: 45.7°
C - Segment: 2303-2318 - Tilt: 6.3°
C - Segment: 2343-2360 - Tilt: 20.9°
C - Segment: 2368-2389 - Tilt: 34.1°
C - Segment: 2418-2435 - Tilt: 14.4°
C - Segment: 2732-2749 - Tilt: 16.3°
C - Segment: 2821-2839 - Tilt: 22.3°
C - Segment: 2844-2862 - Tilt: 23.6°
B - Segment: 989-1006 - Tilt: 18.0°
B - Segment: 1296-1314 - Tilt: 12.9°
B - Segment: 1322-1343 - Tilt: 43.8°
B - Segment: 1351-1365 - Tilt: 2.3°
B - Segment: 1375-1392 - Tilt: 12.5°
B - Segment: 1402-1422 - Tilt: 27.0°
B - Segment: 1447-1466 - Tilt: 14.9°
B - Segment: 1782-1799 - Tilt: 14.3°
B - Segment: 1804-1827 - Tilt: 51.8°
B - Segment: 1835-1853 - Tilt: 9.6°
B - Segment: 1876-1893 - Tilt: 21.6°
B - Segment: 1902-1924 - Tilt: 37.2°
Structural assessment:
MAIDEN score = -285.3315
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]