BamA from Haemophilus ducreyi lacking POTRA domains 1-3
Organism: Haemophilus ducreyi
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF01103
PDB ID: 4K3C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 13
Sequence positions:
A: 451-460|464-472|480-487|508-515|522-529|570-577|591-598|609-616|629-636|692-699|716-724|749-761|763-775
Tilt angles:
A - Segment: 451-460 - Tilt: 49.0°
A - Segment: 464-472 - Tilt: 43.2°
A - Segment: 480-487 - Tilt: 35.0°
A - Segment: 508-515 - Tilt: 27.0°
A - Segment: 522-529 - Tilt: 27.8°
A - Segment: 570-577 - Tilt: 33.5°
A - Segment: 591-598 - Tilt: 38.6°
A - Segment: 609-616 - Tilt: 37.0°
A - Segment: 629-636 - Tilt: 39.7°
A - Segment: 692-699 - Tilt: 39.6°
A - Segment: 716-724 - Tilt: 40.4°
A - Segment: 749-761 - Tilt: 53.2°
A - Segment: 763-775 - Tilt: 59.0°
Structural assessment:
MAIDEN score = 30.6040
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]