BamA from Haemophilus ducreyi lacking POTRA domains 1-3
Organism: Haemophilus ducreyi
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF01103
PDB ID: 4K3C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 19.8 Å
Number of TM segments = 9
Sequence positions:
A: 159-169|249-256|259-265|311-318|328-334|350-357|366-372|433-440|454-461
Tilt angles:
A - Segment: 159-169 - Tilt: 57.4°
A - Segment: 249-256 - Tilt: 38.5°
A - Segment: 259-265 - Tilt: 34.9°
A - Segment: 311-318 - Tilt: 37.3°
A - Segment: 328-334 - Tilt: 34.7°
A - Segment: 350-357 - Tilt: 39.7°
A - Segment: 366-372 - Tilt: 33.3°
A - Segment: 433-440 - Tilt: 36.3°
A - Segment: 454-461 - Tilt: 35.1°
Structural assessment:
MAIDEN score = 166.9103
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]