Selenium substituted Ca²⁺/H⁺ antiporter proteinYfkE
Organism: Bacillus subtilis
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01699
PDB ID: 4KJR
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.3 Å
Number of TM segments = 9
Sequence positions:
A: 4-18|29-45|130-145|158-172|208-221|241-257|278-293|307-321|335-348
Tilt angles:
A - Segment: 4-18 - Tilt: 30.4°
A - Segment: 29-45 - Tilt: 31.2°
A - Segment: 130-145 - Tilt: 8.5°
A - Segment: 158-172 - Tilt: 21.4°
A - Segment: 208-221 - Tilt: 27.6°
A - Segment: 241-257 - Tilt: 18.9°
A - Segment: 278-293 - Tilt: 37.0°
A - Segment: 307-321 - Tilt: 3.9°
A - Segment: 335-348 - Tilt: 20.1°
Structural assessment:
MAIDEN score = -27.2063
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]