P-glycoprotein reveal its conformational flexibility and an epitope on the nucleotide-binding domain
Organism: Mus musculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00664
PDB ID: 4KSB
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.2 Å
Number of TM segments = 11
Sequence positions:
A: 86-111|143-167|179-199|256-277|299-328|619-639|662-682|738-760|762-790|832-860|882-902
Tilt angles:
A - Segment: 86-111 - Tilt: 41.8°
A - Segment: 143-167 - Tilt: 30.1°
A - Segment: 179-199 - Tilt: 14.0°
A - Segment: 256-277 - Tilt: 12.2°
A - Segment: 299-328 - Tilt: 44.3°
A - Segment: 619-639 - Tilt: 25.2°
A - Segment: 662-682 - Tilt: 5.1°
A - Segment: 738-760 - Tilt: 25.9°
A - Segment: 762-790 - Tilt: 48.9°
A - Segment: 832-860 - Tilt: 47.4°
A - Segment: 882-902 - Tilt: 12.9°
Structural assessment:
MAIDEN score = -58.5215
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]