P-glycoprotein reveal its conformational flexibility and an epitope on the nucleotide-binding domain
Organism: Mus musculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00664
PDB ID: 4KSC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
A: 191-209|255-272|588-596|628-642|655-678|744-788|874-904
Tilt angles:
A - Segment: 191-209 - Tilt: 47.1°
A - Segment: 255-272 - Tilt: 52.6°
A - Segment: 588-596 - Tilt: 68.5°
A - Segment: 628-642 - Tilt: 42.7°
A - Segment: 655-678 - Tilt: 54.8°
A - Segment: 744-788 - Tilt: 60.0°
A - Segment: 874-904 - Tilt: 70.2°
Structural assessment:
MAIDEN score = -32.5476
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]