Glucose transporter from Staphylococcus epidermidis
Organism: Staphylococcus epidermidis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00083
PDB ID: 4LDS
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 22
Sequence positions:
A: 39-56|63-79|93-114|123-139|164-177|241-254|277-292|300-317|333-351|371-388|394-409
B: 460-477|486-501|515-531|548-562|582-596|662-675|696-709|722-738|753-769|792-806|816-830
Tilt angles:
A - Segment: 39-56 - Tilt: 47.5°
A - Segment: 63-79 - Tilt: 27.8°
A - Segment: 93-114 - Tilt: 53.8°
A - Segment: 123-139 - Tilt: 22.5°
A - Segment: 164-177 - Tilt: 32.2°
A - Segment: 241-254 - Tilt: 5.4°
A - Segment: 277-292 - Tilt: 19.0°
A - Segment: 300-317 - Tilt: 41.1°
A - Segment: 333-351 - Tilt: 33.4°
A - Segment: 371-388 - Tilt: 42.2°
A - Segment: 394-409 - Tilt: 23.1°
B - Segment: 460-477 - Tilt: 40.7°
B - Segment: 486-501 - Tilt: 19.2°
B - Segment: 515-531 - Tilt: 37.1°
B - Segment: 548-562 - Tilt: 7.1°
B - Segment: 582-596 - Tilt: 35.4°
B - Segment: 662-675 - Tilt: 18.0°
B - Segment: 696-709 - Tilt: 3.5°
B - Segment: 722-738 - Tilt: 27.8°
B - Segment: 753-769 - Tilt: 26.9°
B - Segment: 792-806 - Tilt: 33.0°
B - Segment: 816-830 - Tilt: 9.9°
Structural assessment:
MAIDEN score = -20.7435
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]