Substrate bound outward-open state of the symporter BetP
Organism: Corynebacterium glutamicum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02028
PDB ID: 4LLH
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 33
Sequence positions:
A: 58-73|99-119|138-152|186-204|231-254|370-389|396-414|459-483|485-502|522-540
C: 62-80|94-116|142-158|182-201|237-258|279-295|366-385|398-416|455-477|490-507|518-537
B: 59-75|99-118|139-158|182-203|232-258|280-296|300-324|367-385|398-416|452-480|489-505|521-539
Tilt angles:
A - Segment: 58-73 - Tilt: 17.2°
A - Segment: 99-119 - Tilt: 43.2°
A - Segment: 138-152 - Tilt: 23.6°
A - Segment: 186-204 - Tilt: 39.0°
A - Segment: 231-254 - Tilt: 43.8°
A - Segment: 370-389 - Tilt: 24.8°
A - Segment: 396-414 - Tilt: 18.2°
A - Segment: 459-483 - Tilt: 45.1°
A - Segment: 485-502 - Tilt: 18.8°
A - Segment: 522-540 - Tilt: 31.3°
C - Segment: 62-80 - Tilt: 18.0°
C - Segment: 94-116 - Tilt: 49.5°
C - Segment: 142-158 - Tilt: 16.2°
C - Segment: 182-201 - Tilt: 26.2°
C - Segment: 237-258 - Tilt: 49.0°
C - Segment: 279-295 - Tilt: 14.4°
C - Segment: 366-385 - Tilt: 20.1°
C - Segment: 398-416 - Tilt: 29.8°
C - Segment: 455-477 - Tilt: 41.3°
C - Segment: 490-507 - Tilt: 18.6°
C - Segment: 518-537 - Tilt: 41.6°
B - Segment: 59-75 - Tilt: 9.5°
B - Segment: 99-118 - Tilt: 36.5°
B - Segment: 139-158 - Tilt: 9.0°
B - Segment: 182-203 - Tilt: 39.9°
B - Segment: 232-258 - Tilt: 55.7°
B - Segment: 280-296 - Tilt: 11.8°
B - Segment: 300-324 - Tilt: 43.5°
B - Segment: 367-385 - Tilt: 24.8°
B - Segment: 398-416 - Tilt: 36.3°
B - Segment: 452-480 - Tilt: 61.0°
B - Segment: 489-505 - Tilt: 11.1°
B - Segment: 521-539 - Tilt: 33.2°
Structural assessment:
MAIDEN score = -331.9603
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]