Substrate bound outward-open state of the symporter BetP
Organism: Corynebacterium glutamicum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02028
PDB ID: 4LLH
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 34
Sequence positions:
A: 3-19|42-60|83-103|123-145|176-202|220-236|242-291|307-326|339-359|389-421|430-447|459-479
C: 1018-1035|1054-1076|1099-1115|1142-1163|1192-1215|1319-1339|1350-1368|1409-1434|1440-1456|1472-1491
B: 530-549|555-584|610-627|647-668|705-730|744-762|769-820|831-852|866-886|917-944|960-976|980-1005
Tilt angles:
A - Segment: 3-19 - Tilt: 6.3°
A - Segment: 42-60 - Tilt: 36.5°
A - Segment: 83-103 - Tilt: 5.2°
A - Segment: 123-145 - Tilt: 39.8°
A - Segment: 176-202 - Tilt: 56.6°
A - Segment: 220-236 - Tilt: 4.3°
A - Segment: 242-291 - Tilt: 56.0°
A - Segment: 307-326 - Tilt: 16.6°
A - Segment: 339-359 - Tilt: 31.4°
A - Segment: 389-421 - Tilt: 60.6°
A - Segment: 430-447 - Tilt: 13.6°
A - Segment: 459-479 - Tilt: 42.8°
C - Segment: 1018-1035 - Tilt: 8.4°
C - Segment: 1054-1076 - Tilt: 40.7°
C - Segment: 1099-1115 - Tilt: 21.3°
C - Segment: 1142-1163 - Tilt: 34.1°
C - Segment: 1192-1215 - Tilt: 42.3°
C - Segment: 1319-1339 - Tilt: 21.0°
C - Segment: 1350-1368 - Tilt: 24.5°
C - Segment: 1409-1434 - Tilt: 46.7°
C - Segment: 1440-1456 - Tilt: 15.8°
C - Segment: 1472-1491 - Tilt: 26.6°
B - Segment: 530-549 - Tilt: 9.1°
B - Segment: 555-584 - Tilt: 51.9°
B - Segment: 610-627 - Tilt: 3.8°
B - Segment: 647-668 - Tilt: 35.8°
B - Segment: 705-730 - Tilt: 49.8°
B - Segment: 744-762 - Tilt: 21.4°
B - Segment: 769-820 - Tilt: 54.6°
B - Segment: 831-852 - Tilt: 29.0°
B - Segment: 866-886 - Tilt: 23.7°
B - Segment: 917-944 - Tilt: 51.9°
B - Segment: 960-976 - Tilt: 17.7°
B - Segment: 980-1005 - Tilt: 45.9°
Structural assessment:
MAIDEN score = -381.5068
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]