GLIC Liganded-closed-channel Conformation, Mutant T25'A
Organism: Gloeobacter violaceus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 4LMJ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 36.0 Å
Number of TM segments = 16
Sequence positions:
A: 1118-1141|1143-1166|1175-1199|1214-1239
C: 808-831|833-856|865-889
B: 498-521|523-546|555-579
E: 188-211|213-236|245-269
D: 1428-1451|1453-1476|1485-1509
Tilt angles:
A - Segment: 1118-1141 - Tilt: 21.8°
A - Segment: 1143-1166 - Tilt: 3.9°
A - Segment: 1175-1199 - Tilt: 10.4°
A - Segment: 1214-1239 - Tilt: 22.9°
C - Segment: 808-831 - Tilt: 21.2°
C - Segment: 833-856 - Tilt: 2.6°
C - Segment: 865-889 - Tilt: 11.3°
B - Segment: 498-521 - Tilt: 21.3°
B - Segment: 523-546 - Tilt: 2.7°
B - Segment: 555-579 - Tilt: 11.3°
E - Segment: 188-211 - Tilt: 22.5°
E - Segment: 213-236 - Tilt: 3.9°
E - Segment: 245-269 - Tilt: 11.6°
D - Segment: 1428-1451 - Tilt: 22.3°
D - Segment: 1453-1476 - Tilt: 3.0°
D - Segment: 1485-1509 - Tilt: 12.4°
Structural assessment:
MAIDEN score = -287.8163
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]